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Approximate search for known gene clusters in new genomes using PQ-trees
We report on 29 chromosomal gene clusters that are rearranged in plasmids, where the rearrangements are guided by the corresponding PQ-trees. One of these results, coding for a heavy metal efflux pump, is further analysed to exemplify how PQFinder can be harnessed to reveal interesting new structural variants of known gene clusters.PMID:34243815 | PMC:PMC8272295 | DOI:10.1186/s13015-021-00190-9
Source: Algorithms for Molecular Biology : AMB - July 10, 2021 Category: Molecular Biology Authors: Galia R Zimerman Dina Svetlitsky Meirav Zehavi Michal Ziv-Ukelson Source Type: research
